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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmrta2DMRT-like family A2. (451 aa)    
Predicted Functional Partners:
kptn
Kaptin (actin binding protein).
    
 0.703
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.699
depdc5
DEP domain containing 5.
   
 0.655
wdr59
WD repeat domain 59.
    
 0.645
wdr24
WD repeat domain 24.
    
 0.641
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.637
LOC111224285
X-ray repair complementing defective repair in Chinese hamster cells 4.
    
 0.552
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.552
immp1l
Mitochondrial inner membrane protease subunit.
    
 0.552
nprl3
NPR3-like, GATOR1 complex subunit.
     
 0.499
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.