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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr101G protein-coupled receptor 101; Belongs to the G-protein coupled receptor 1 family. (411 aa)    
Predicted Functional Partners:
rbmx
RNA binding motif protein X-linked.
      
 0.602
LOC111236694
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.583
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
      
 0.533
asb12
Ankyrin repeat and SOCS box-containing 12b.
     
 0.476
cirbp
Cold inducible RNA binding protein b.
      
 0.437
pwwp2b
PWWP domain containing 2B.
      
 0.431
plagl2
Pleiomorphic adenoma gene-like 2.
      
 0.430
plag1
Pleiomorphic adenoma gene 1.
      
 0.430
LOC111218426
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.426
SLC25A30
Solute carrier family 25 member 30; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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