STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoqRas homolog family member Q. (218 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
    
 0.990
itsn2
Intersectin 2a.
    
 0.990
TRIP10
Thyroid hormone receptor interactor 10b.
    
 0.949
LOC111217475
Thyroid hormone receptor interactor 10a.
    
 0.949
LOC111238220
CRK proto-oncogene, adaptor protein.
   
 
 0.933
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
   
 
 0.933
LOC111233089
Uncharacterized protein.
   
 
 0.933
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.904
ENSSDUP00000004365
Uncharacterized protein.
   
 0.807
LOC111223136
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.725
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.