STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcfd2Multiple coagulation factor deficiency 2. (155 aa)    
Predicted Functional Partners:
lman1
Lectin, mannose-binding, 1.
   
 0.997
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
     
 0.700
sec24c
SEC24 homolog C, COPII coat complex component.
     
 0.700
LOC111232364
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
     
 0.700
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
     
 0.668
sec24d
SEC24 homolog D, COPII coat complex component.
     
 0.662
scfd1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.661
edil3
EGF-like repeats and discoidin I-like domains 3a.
     
 0.644
uso1
USO1 vesicle transport factor.
   
 
 0.637
gosr2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 
  0.628
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.