STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000000340Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 0.548
LOC111235891
GRB2 related adaptor protein 2b.
   
 0.546
grap2
GRB2 related adaptor protein 2a.
   
 0.546
ENSSDUP00000027327
DDE_3 domain-containing protein.
  
     0.510
ENSSDUP00000030112
DDE_3 domain-containing protein.
  
     0.510
ENSSDUP00000017463
DDE_3 domain-containing protein.
  
     0.505
ENSSDUP00000030747
DDE_3 domain-containing protein.
  
     0.502
ENSSDUP00000030432
DDE_3 domain-containing protein.
  
     0.499
ENSSDUP00000010517
Uncharacterized protein.
  
     0.495
ENSSDUP00000008217
HTH_Tnp_Tc3_2 domain-containing protein.
  
 
  0.493
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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