STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (335 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.974
LOC111239905
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.974
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.957
LOC111239951
RRM domain-containing protein.
   
 0.953
LOC111231015
RRM domain-containing protein.
   
 0.953
rbmx
RNA binding motif protein X-linked.
  
0.943
LOC111220866
Uncharacterized protein.
   
 0.914
LOC111230261
RRM domain-containing protein.
  
 0.772
alyref
Aly/REF export factor.
  
 0.725
ENSSDUP00000002880
Heterogeneous nuclear ribonucleoprotein M.
   
 0.700
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.