STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111229608Creatine kinase, mitochondrial 1A; Belongs to the ATP:guanido phosphotransferase family. (415 aa)    
Predicted Functional Partners:
gamt
Guanidinoacetate N-methyltransferase; Converts guanidinoacetate to creatine, using S- adenosylmethionine as the methyl donor. Belongs to the class I-like SAM-binding methyltransferase superfamily. RMT2 methyltransferase family.
   
 
 0.929
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.694
LOC111218131
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.593
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 
 0.471
LOC111219734
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 
 0.471
vdac1
Voltage-dependent anion channel 1.
   
 0.448
LOC111234726
Troponin C type 2 (fast).
   
 
 0.422
clpp
ATP-dependent Clp protease proteolytic subunit.
   
  
 0.401
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.