STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zmynd10Zinc finger, MYND-type containing 10. (456 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.990
nprl2
NPR2 like, GATOR1 complex subunit.
 
    
 0.780
dnaaf1
Dynein assembly factor 1, axonemal.
  
 
 0.706
lrrc6
Leucine rich repeat containing 6.
    
 0.705
RSPH1
Radial spoke head component 1.
   
 
 0.697
wdr35
WD repeat-containing protein 35.
    
 0.691
IFT122
Intraflagellar transport 122.
   
 0.685
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.668
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 
 0.668
wdr19
WD repeat domain 19.
    
 0.667
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.