Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111219466Myosin binding protein Hb. (524 aa)    
Predicted Functional Partners:
LOC111218935
Myosin binding protein Ha.
  
  
 
0.901
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.810
LOC111232025
Im:7152348.
    
 0.747
LOC111218078
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.705
ENSSDUP00000010872
Ig-like domain-containing protein.
 
 
  0.652
LOC111217580
Intersectin 2b.
    
 0.651
itsn2
Intersectin 2a.
    
 0.651
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.641
WDR1
WD repeat domain 1.
   
 0.637
arpc3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.635
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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