Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC111236055G_PROTEIN_RECEP_F1_2 domain-containing protein. (357 aa)    
Predicted Functional Partners:
cxcl13
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
     
 0.915
LOC111236054
Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family.
     
0.903
CXCR3
C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.903
LOC111231219
SCY domain-containing protein.
     
  0.900
LOC111231239
SCY domain-containing protein.
     
  0.900
cxcl11
SCY domain-containing protein.
     
  0.900
LOC111230103
Interleukin 11a.
      
 0.501
bmp6
Bone morphogenetic protein 6.
     
 0.436
ENSSDUP00000007198
Uncharacterized protein.
     
 0.422
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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