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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnna2Catenin (cadherin-associated protein), alpha 2. (905 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.989
LOC111222989
Uncharacterized protein.
   
 0.977
LOC111219856
Vinculin b.
    
0.966
LOC111216734
Uncharacterized protein.
    
 0.932
ACTN4
Actinin alpha 4.
   
 0.931
LOC111225279
Actinin, alpha 1.
   
 0.931
LOC111238329
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.922
ctnna1
Catenin (cadherin-associated protein), alpha 1.
  
  
 
0.901
LOC111229402
Junction plakoglobin a.
   
 0.787
LOC111236265
Uncharacterized protein.
   
 0.787
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.