Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xkrxXK-related protein. (492 aa)    
Predicted Functional Partners:
LOC111222344
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.867
ncf1
Neutrophil cytosolic factor 1.
   
 0.849
LOC111229876
Dual oxidase 2.
   
 0.844
ncf4
Neutrophil cytosolic factor 4.
   
 0.766
LOC111228211
Neutrophil cytosolic factor 2.
   
 0.759
LOC111230335
NADPH oxidase activator 1.
   
 0.759
nox4
FAD-binding FR-type domain-containing protein.
    
 0.673
LOC111220155
NADPH oxidase organizer 1b.
   
 0.671
LOC111227101
NADPH oxidase organizer 1a.
   
 0.671
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
   
  
 0.640
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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