Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AXLAXL receptor tyrosine kinase. (943 aa)    
Predicted Functional Partners:
gas6
Uncharacterized protein.
    
 0.979
LOC111223159
Engulfment and cell motility 1.
    
 0.907
pros1
Protein S.
   
 0.890
grb2
Growth factor receptor-bound protein 2b.
   
 0.806
nudcd1
NudC domain containing 1.
   
   0.748
fryl
Furry homolog, like.
    
 
 0.718
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.636
LOC111239159
Purinergic receptor P2Y12.
     
 0.635
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 0.629
C1QA
Complement C1q A chain.
   
 0.618
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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