Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217358Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
mtx2
Metaxin 2.
    
   0.894
chchd3
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
   0.694
abtb1
Ankyrin repeat and BTB (POZ) domain containing 1.
      
 0.605
LOC111222695
Trafficking protein, kinesin binding 2.
    
   0.585
micos13
MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.573
rhbdd2
Rhomboid domain containing 2.
      
 0.552
bud13
BUD13 homolog.
      
 0.513
LOC111229205
Coiled-coil domain containing 85A, like.
      
 0.512
nup43
Nucleoporin 43.
      
 0.503
brat1
BRCA1-associated ATM activator 1.
      
 0.470
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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