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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc10a2Solute carrier family 10 member 2. (376 aa)    
Predicted Functional Partners:
slc10a7
Sodium/bile acid cotransporter; Does not show transport activity towards bile acids or steroid sulfates; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
      
 0.663
nepro
Nucleolus and neural progenitor protein.
      
 0.620
Tmigd1
Transmembrane and immunoglobulin domain containing 1.
   
  
 0.599
LOC111239136
Fatty acid binding protein 6, ileal (gastrotropin).
   
  
 0.561
LOC111225478
Si:ch211-195e19.1.
      
 0.548
LOC111221943
Si:dkey-28n18.9.
     
 0.523
LOC111232752
Phosphoethanolamine methyltransferase.
      
 0.523
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
     
 0.507
zfand1
Zinc finger, AN1-type domain 1.
      
 0.480
LOC111219085
Elastase 2; Belongs to the peptidase S1 family.
   
  
 0.456
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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