Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cunh4orf33Zgc:77739. (193 aa)    
Predicted Functional Partners:
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.838
mrps18c
Mitochondrial ribosomal protein S18C.
      
 0.768
LOC111217000
Myelin protein zero-like 1 like.
      
 0.722
srrm1
Serine/arginine repetitive matrix 1.
      
 0.713
LOC111227644
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.622
slc31a2
Solute carrier family 31 member 2.
      
 0.622
LOC111222991
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.622
vac14
Vac14 homolog (S. cerevisiae).
    
   0.619
zfyve19
Zinc finger, FYVE domain containing 19.
      
 0.612
synrg
Synergin, gamma.
      
 0.600
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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