STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111216649ATCAY kinesin light chain interacting caytaxin a. (340 aa)    
Predicted Functional Partners:
PRUNE1
Prune exopolyphosphatase.
 
      0.725
LOC111217580
Intersectin 2b.
    
 0.722
itsn2
Intersectin 2a.
    
 0.722
mapkap1
MAPK associated protein 1.
    
 0.596
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.562
ENSSDUP00000027536
RICTOR_N domain-containing protein.
    
 0.513
LOC111226513
RPTOR independent companion of MTOR, complex 2 a.
    
 0.513
ENSSDUP00000008036
MTOR associated protein, LST8 homolog.
    
 0.510
ENSSDUP00000008073
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.510
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.457
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.