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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111236411Hippocalcin-like 1. (193 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.673
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.673
ENSSDUP00000002313
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.611
LOC111234069
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.611
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
0.498
calm3
Calmodulin 3.
    
0.498
LOC111216424
Calmodulin.
    
0.498
LOC111225267
Calmodulin.
    
0.498
wdr90
WD repeat domain 90.
    
 0.486
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.484
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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