Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
skap2Src kinase associated phosphoprotein 2. (343 aa)    
Predicted Functional Partners:
dapp1
Dual adaptor of phosphotyrosine and 3-phosphoinositides.
   
 
 0.768
klhl6
Kelch-like family member 6.
   
  
 0.716
LOC111240029
SH3 domain-containing protein.
   
 0.683
LOC111235128
Tyrosine-protein kinase.
   
 
 0.657
LOC111233537
Tyrosine-protein kinase.
   
 
 0.653
TATDN3
TatD DNase domain containing 3.
      
 0.612
LOC111231733
TatD DNase domain containing 3.
      
 0.612
cpvl
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
      
 0.607
LOC111226938
Ig-like domain-containing protein.
   
 
 0.585
ENSSDUP00000032514
Lymphocyte cytosolic protein 2a.
   
 
 0.584
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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