STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap99Cilia and flagella associated protein 99. (654 aa)    
Predicted Functional Partners:
ankef1
Ankyrin repeat and EF-hand domain containing 1a.
   
  0.641
LOC111240095
Radial spoke head component 4A.
   
 
 0.612
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.574
LOC111216788
NYD-SP28 domain-containing protein.
   
   0.573
LOC111221897
NYD-SP28 domain-containing protein.
   
   0.573
pank4
Pantothenate kinase.
    
 
 0.513
ssna1
Sjogren syndrome nuclear autoantigen 1.
      
 0.511
ENSSDUP00000006845
Uncharacterized protein.
    
 
 0.501
cfap70
Cilia and flagella associated protein 70.
   
 0.470
ENSSDUP00000004365
Uncharacterized protein.
   
 0.469
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.