Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
efcab2EF-hand calcium binding domain 2. (160 aa)    
Predicted Functional Partners:
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.848
efhb
EF-hand domain family, member B.
   
 
 0.794
ENSSDUP00000007690
Zgc:113436.
   
 
 0.789
ccm2
CCM2 scaffold protein.
    
 0.778
LOC111238800
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 0.771
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.761
efcab1
EF-hand calcium binding domain 1.
   
 0.741
morn3
MORN repeat containing 3.
    
 
 0.717
ENSSDUP00000007983
Zona pellucida glycoprotein 3d tandem duplicate 2.
      
 0.715
zar1l
Zygote arrest 1-like.
      
 0.669
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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