STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gemGTP binding protein overexpressed in skeletal muscle. (289 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
    
 0.825
itsn2
Intersectin 2a.
    
 0.825
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.723
ENSSDUP00000004365
Uncharacterized protein.
   
 0.692
cda
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 
 0.599
mpi
Mannose-6-phosphate isomerase.
    
 
 0.598
mst1r
Macrophage stimulating 1 receptor b.
   
 0.597
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.597
LOC111222844
Macrophage stimulating 1 receptor a.
   
 0.597
LOC111232025
Im:7152348.
   
 0.582
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.