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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111225411Si:dkey-21a6.5. (314 aa)    
Predicted Functional Partners:
ENSSDUP00000011354
Si:dkeyp-110a12.4.
  
 
 0.686
LOC111238808
Tenascin XBa.
    
 0.673
LOC111228257
Tenascin C.
    
 0.673
tnr
Tenascin R (restrictin, janusin).
    
 0.673
ENSSDUP00000016974
Uncharacterized protein.
    
 0.673
tnn
Tenascin N.
    
 0.673
LOC111217856
Zmp:0000000846.
    
 0.673
ENSSDUP00000004365
Uncharacterized protein.
   
 0.657
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.567
LOC111232635
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.563
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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