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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
espnEspin. (830 aa)    
Predicted Functional Partners:
myo3a
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.780
myo3b
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.780
whrn
Whirlin a.
    
 0.633
LOC111231647
Whirlin b.
    
 0.633
LOC111222861
Twinfilin actin-binding protein 2b.
    
 0.555
twf1
Twinfilin actin-binding protein 1a.
    
 0.555
ush1c
Usher syndrome 1C.
   
 0.530
ENSSDUP00000011222
Stereocilin 1.
   
 0.523
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.486
ift81
Intraflagellar transport 81 homolog.
    
 0.467
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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