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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hars1Histidyl-tRNA synthetase. (522 aa)    
Predicted Functional Partners:
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.964
yars1
Tyrosine--tRNA ligase.
  
 
 0.962
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.941
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.907
kars1
Lysine--tRNA ligase.
  
 
 0.892
vars1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.880
lars1
Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.878
qars1
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.833
psmd14
Proteasome 26S subunit, non-ATPase 14.
  
 
 0.827
dars2
Aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.819
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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