Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tspan6Tetraspanin. (251 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
    
 0.639
tspan31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.475
dhrs7b
Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.447
tnip1
TNFAIP3 interacting protein 1.
    
 
 0.446
ttc1
Tetratricopeptide repeat domain 1.
      
 0.446
atpaf1
ATP synthase mitochondrial F1 complex assembly factor 1.
      
 0.445
tspan12
Tetraspanin.
   
  
 0.443
ENSSDUP00000026339
UEV domain-containing protein.
    
 
 0.443
tsg101
Tumor susceptibility 101a.
    
 
 0.443
scarb1
Scavenger receptor class B, member 1; Belongs to the CD36 family.
     
 0.433
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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