Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC111229403Kv channel interacting protein 2. (221 aa)    
Predicted Functional Partners:
ENSSDUP00000000545
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
    
 0.651
kcnd2
Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.
    
 0.651
kcnd3
Potassium voltage-gated channel, Shal-related subfamily, member 3; Belongs to the potassium channel family.
    
 0.651
LOC111229839
BTB domain-containing protein; Belongs to the potassium channel family.
    
 0.651
KCND3
BTB domain-containing protein; Belongs to the potassium channel family.
    
 0.651
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.449
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.449
paxip1
PAX interacting (with transcription-activation domain) protein 1.
      
 0.445
cmbl
Carboxymethylenebutenolidase homolog (Pseudomonas).
    
 
 0.428
wdr90
WD repeat domain 90.
    
  0.414
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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