Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111216956Uncharacterized protein; Belongs to the cytochrome P450 family. (491 aa)    
Predicted Functional Partners:
ENSSDUP00000021842
Uncharacterized protein.
  
 0.559
LOC111237347
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
   
 0.545
LOC111216641
Cytochrome P450, family 3, subfamily A, polypeptide 65.
  
0.539
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.535
LOC111233897
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
  
 0.531
bard1
BRCA1 associated RING domain 1.
    
 0.478
fasn
Coiled-coil domain containing 57.
  
 0.476
dhrs1
Dehydrogenase/reductase (SDR family) member 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.450
exo1
Exonuclease 1.
    
 0.440
LOC111216640
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.433
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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