Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111229669Protein phosphatase 1, regulatory subunit 15B. (610 aa)    
Predicted Functional Partners:
LOC111219089
Protein phosphatase 1, regulatory subunit 3Da.
     
  0.540
LOC111224234
Protein phosphatase 1 regulatory subunit.
     
  0.540
ENSSDUP00000011512
CBM21 domain-containing protein.
     
  0.540
ppp1r10
Protein phosphatase 1, regulatory subunit 10.
     
  0.540
ENSSDUP00000015014
Protein phosphatase 1, regulatory subunit 3Db.
     
  0.540
LOC111220199
Protein phosphatase 1 regulatory subunit.
     
  0.540
Ppp1r3b
Protein phosphatase 1 regulatory subunit.
     
  0.540
Ppp1r3g
Si:ch211-152c8.5.
     
  0.540
LOC111219387
PP1c_bdg domain-containing protein.
     
 
0.540
ENSSDUP00000027863
CBM21 domain-containing protein.
     
  0.540
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.