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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111238800Tax1 (human T-cell leukemia virus type I) binding protein 1b. (842 aa)    
Predicted Functional Partners:
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.986
LOC111238835
GABA(A) receptor-associated protein like 2.
   
 0.937
gabarap
GABA(A) receptor-associated protein b.
   
 0.937
LOC111230109
Zgc:92606.
   
  0.917
LOC111223177
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
  
  
 
0.902
azi2
5-azacytidine induced 2.
    
 
 0.872
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.813
tbk1
TANK-binding kinase 1.
    
 0.747
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.708
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
     
 0.662
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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