Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
armh3Armadillo like helical domain containing 3. (689 aa)    
Predicted Functional Partners:
ENSSDUP00000002313
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.758
LOC111234069
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.758
cnot10
CCR4-NOT transcription complex, subunit 10.
      
 0.648
LOC111233882
Nucleolar protein 7.
      
 0.648
ENSSDUP00000006952
Sb:cb649.
      
 0.627
relch
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
      
 0.621
npm3
Nucleophosmin/nucleoplasmin, 3.
      
 0.578
acbd3
Acyl-Coenzyme A binding domain containing 3.
      
 0.568
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
      
 0.519
fbxw4
F-box and WD repeat domain containing 4.
      
 0.517
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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