Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000014726 | LOC111228852 | ENSSDUP00000014726 | ENSSDUP00000001478 | CNH domain-containing protein. | Oxidative stress responsive kinase 1a. | 0.804 |
LOC111221564 | LOC111228852 | ENSSDUP00000011308 | ENSSDUP00000001478 | Plug_translocon domain-containing protein. | Oxidative stress responsive kinase 1a. | 0.744 |
LOC111221564 | sec61b | ENSSDUP00000011308 | ENSSDUP00000016779 | Plug_translocon domain-containing protein. | SEC61 translocon beta subunit. | 0.950 |
LOC111221564 | sec61g | ENSSDUP00000011308 | ENSSDUP00000005221 | Plug_translocon domain-containing protein. | SEC61 translocon gamma subunit. | 0.993 |
LOC111221564 | sec62 | ENSSDUP00000011308 | ENSSDUP00000016928 | Plug_translocon domain-containing protein. | SEC62 homolog, preprotein translocation factor. | 0.938 |
LOC111221564 | sec63 | ENSSDUP00000011308 | ENSSDUP00000017361 | Plug_translocon domain-containing protein. | SEC63 homolog, protein translocation regulator. | 0.999 |
LOC111226582 | LOC111228852 | ENSSDUP00000017500 | ENSSDUP00000001478 | Calcium binding protein 39, like 1. | Oxidative stress responsive kinase 1a. | 0.558 |
LOC111226582 | LOC111237543 | ENSSDUP00000017500 | ENSSDUP00000029319 | Calcium binding protein 39, like 1. | Calcium binding protein 39-like. | 0.901 |
LOC111226582 | cab39 | ENSSDUP00000017500 | ENSSDUP00000014212 | Calcium binding protein 39, like 1. | Calcium binding protein 39. | 0.901 |
LOC111228852 | ENSSDUP00000014726 | ENSSDUP00000001478 | ENSSDUP00000014726 | Oxidative stress responsive kinase 1a. | CNH domain-containing protein. | 0.804 |
LOC111228852 | LOC111221564 | ENSSDUP00000001478 | ENSSDUP00000011308 | Oxidative stress responsive kinase 1a. | Plug_translocon domain-containing protein. | 0.744 |
LOC111228852 | LOC111226582 | ENSSDUP00000001478 | ENSSDUP00000017500 | Oxidative stress responsive kinase 1a. | Calcium binding protein 39, like 1. | 0.558 |
LOC111228852 | LOC111237543 | ENSSDUP00000001478 | ENSSDUP00000029319 | Oxidative stress responsive kinase 1a. | Calcium binding protein 39-like. | 0.558 |
LOC111228852 | cab39 | ENSSDUP00000001478 | ENSSDUP00000014212 | Oxidative stress responsive kinase 1a. | Calcium binding protein 39. | 0.558 |
LOC111228852 | sec61a1 | ENSSDUP00000001478 | ENSSDUP00000029866 | Oxidative stress responsive kinase 1a. | Plug_translocon domain-containing protein. | 0.744 |
LOC111228852 | sec61b | ENSSDUP00000001478 | ENSSDUP00000016779 | Oxidative stress responsive kinase 1a. | SEC61 translocon beta subunit. | 0.818 |
LOC111228852 | sec61g | ENSSDUP00000001478 | ENSSDUP00000005221 | Oxidative stress responsive kinase 1a. | SEC61 translocon gamma subunit. | 0.887 |
LOC111228852 | sec62 | ENSSDUP00000001478 | ENSSDUP00000016928 | Oxidative stress responsive kinase 1a. | SEC62 homolog, preprotein translocation factor. | 0.884 |
LOC111228852 | sec63 | ENSSDUP00000001478 | ENSSDUP00000017361 | Oxidative stress responsive kinase 1a. | SEC63 homolog, protein translocation regulator. | 0.849 |
LOC111237543 | LOC111226582 | ENSSDUP00000029319 | ENSSDUP00000017500 | Calcium binding protein 39-like. | Calcium binding protein 39, like 1. | 0.901 |
page 1 of 3