Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JAZF1JAZF zinc finger 1b. (243 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 
 0.932
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.919
yeats4
YEATS domain containing 4.
    
   0.894
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.888
dmap1
DNA methyltransferase 1 associated protein 1.
    
   0.882
ing3
Inhibitor of growth protein.
    
 
 0.827
LOC111225633
MYCL proto-oncogene, bHLH transcription factor a.
    
   0.804
brd8
Si:ch211-59d17.3.
    
 
 0.771
ENSSDUP00000017717
Uncharacterized protein.
    
 
 0.771
LOC111220393
L3MBTL histone methyl-lysine binding protein 2.
    
 
 0.760
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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