Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hspa4lHeat shock protein 4 like. (832 aa)    
Predicted Functional Partners:
bag2
BCL2 associated athanogene 2.
   
 0.982
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
0.968
hspbp1
HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.
   
 0.966
hspa4
Heat shock protein 4b.
   
  0.959
LOC111234347
Heat shock protein 4a.
   
  0.959
stip1
Stress-induced phosphoprotein 1.
  
 0.942
bag1
BCL2 associated athanogene 1.
   
 0.924
bag3
BCL2 associated athanogene 3.
   
 0.882
hspa12a
Heat shock protein 12A.
   
 0.858
dnajb1
DnaJ heat shock protein family (Hsp40) member B1b.
 
 0.836
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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