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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217401Uncharacterized protein. (758 aa)    
Predicted Functional Partners:
LOC111223096
Uncharacterized protein.
    
 0.716
LOC111230744
Si:ch211-207e14.4.
    
 0.670
il17rd
Interleukin 17 receptor D.
    
 0.670
LOC111220526
SEFIR domain-containing protein.
      
 0.657
LOC111224772
SEFIR domain-containing protein.
    
 0.641
LOC111229700
SEFIR domain-containing protein.
    
 0.641
creld1
SEFIR domain-containing protein.
      
0.607
il17d
Interleukin 17d.
      
 0.601
LOC111216479
Fibronectin type-III domain-containing protein.
  
   
 0.585
LOC111225505
Interleukin 17a/f1.
      
 0.517
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.