Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
prr35Si:ch211-248l17.3. (697 aa)    
Predicted Functional Partners:
rrp36
Ribosomal RNA processing 36.
      
 0.677
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.638
ENSSDUP00000022014
Uncharacterized protein.
      
 0.637
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.599
TMEM43
Uncharacterized protein.
      
 0.597
vwc2
Von Willebrand factor C domain containing 2.
      
 0.590
pkdcc
Protein kinase domain containing, cytoplasmic b.
      
 0.573
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
   
  
 0.516
LOC111219840
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
   
  
 0.516
trappc6b
Trafficking protein particle complex 6b.
      
 0.497
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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