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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prr35Si:ch211-248l17.3. (697 aa)    
Predicted Functional Partners:
rrp36
Ribosomal RNA processing 36.
      
 0.603
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.602
ENSSDUP00000022014
Uncharacterized protein.
      
 0.596
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.589
vwc2
Von Willebrand factor C domain containing 2.
      
 0.571
TMEM43
Uncharacterized protein.
      
 0.569
pkdcc
Protein kinase domain containing, cytoplasmic b.
      
 0.481
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
   
  
 0.461
LOC111219840
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
   
  
 0.461
trappc6b
Trafficking protein particle complex 6b.
      
 0.429
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.