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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STMN1Stathmin; Belongs to the stathmin family. (189 aa)    
Predicted Functional Partners:
LOC111236845
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.911
LOC111230214
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.911
LOC111232890
Uncharacterized protein.
  
  
 
0.902
uhmk1
U2AF homology motif (UHM) kinase 1.
    
 0.626
nisch
Nischarin.
      
 0.583
LOC111220232
Baculoviral IAP repeat containing 5a.
   
 0.551
ckap5
Cytoskeleton associated protein 5.
   
 0.479
LOC111219265
Baculoviral IAP repeat containing 5b.
   
 0.473
gak
Cyclin G associated kinase.
    
 0.435
LOC111230103
Interleukin 11a.
    
 
 0.428
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.