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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plk4Polo-like kinase 4 (Drosophila). (931 aa)    
Predicted Functional Partners:
ENSSDUP00000008822
Uncharacterized protein.
    
 0.968
stil
STIL centriolar assembly protein.
   
 
 0.964
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.955
LOC111218510
RAN binding protein 2.
   
 0.948
espl1
Extra spindle pole bodies like 1, separase.
   
 0.946
LOC111217580
Intersectin 2b.
    
 0.940
itsn2
Intersectin 2a.
    
 0.940
ENSSDUP00000014731
Protein kinase domain-containing protein.
   
 0.874
bub1
BUB1 N-terminal domain-containing protein.
   
 0.874
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.865
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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