Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
cunh4orf47Zgc:153146. (312 aa)    
Predicted Functional Partners:
cunh9orf116
Si:ch211-248e11.2.
    
 
 0.986
efcab1
EF-hand calcium binding domain 1.
    
 
 0.973
iqub
IQ motif and ubiquitin domain containing.
   
 
 0.961
armc3
Armadillo repeat containing 3.
    
 
 0.945
cunh5orf49
Si:dkeyp-46h3.1.
   
 
 0.944
enkur
Enkurin, TRPC channel interacting protein.
   
 
 0.931
ccdc96
Coiled-coil domain containing 96.
    
 0.918
efhb
EF-hand domain family, member B.
   
   0.897
cunh1orf194
Uncharacterized protein.
  
 
   0.895
ccdc173
Coiled-coil domain containing 173.
   
  0.895
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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