close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef11Rho guanine nucleotide exchange factor (GEF) 11. (1374 aa)    
Predicted Functional Partners:
LOC111219813
Uncharacterized protein.
    
 0.742
gna12
G protein subunit alpha 12.
    
 0.742
LOC111236257
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.742
RHOB
Ras homolog family member B.
   
 0.613
LOC111233774
Uncharacterized protein.
   
 0.613
rnd3
Rho family GTPase 3a.
   
 0.613
LOC111219083
Rho family GTPase 1b.
   
 0.613
LOC111222939
Ras homolog gene family, member Ab.
   
 0.613
LOC111218955
Uncharacterized protein.
   
 0.613
LOC111218956
Uncharacterized protein.
   
 0.613
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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