Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111230708Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (239 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.871
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.853
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.798
LOC111238487
TSC complex subunit 1b.
   
 0.780
ENSSDUP00000016177
Uncharacterized protein.
   
 0.780
akt1s1
AKT1 substrate 1 (proline-rich).
    
 0.722
LOC111234619
Ras-related GTP binding A.
    
 0.716
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
   
 
 0.672
LOC111217916
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
 0.656
LOC111239086
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
 0.656
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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