Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC111237175Protein tyrosine phosphatase non-receptor type 3. (874 aa)    
Predicted Functional Partners:
LOC111224692
Mitogen-activated protein kinase.
    
  0.679
LOC111228380
Mitogen-activated protein kinase.
    
  0.679
LOC111221706
Mitogen-activated protein kinase.
    
  0.615
LOC111227590
Mitogen-activated protein kinase.
    
  0.615
LOC111221298
Mitogen-activated protein kinase.
    
  0.615
LOC111218919
Mitogen-activated protein kinase.
    
  0.615
LOC111225013
Mitogen-activated protein kinase.
    
  0.615
eps15
Epidermal growth factor receptor pathway substrate 15.
    
  0.605
LOC111231035
Uncharacterized protein.
    
  0.605
eps15l1
Epidermal growth factor receptor pathway substrate 15-like 1a.
    
  0.605
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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