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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000001711Coiled-coil domain containing 78. (523 aa)    
Predicted Functional Partners:
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.728
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.644
bbof1
Si:ch211-243o19.4.
    
 
 0.631
sufu
Suppressor of fused homolog.
    
 0.591
ckap5
Cytoskeleton associated protein 5.
   
 
 0.528
prc1
Protein regulator of cytokinesis 1b.
   
 
 0.521
LOC111229850
Uncharacterized protein.
   
 
 0.521
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
   
 0.510
ulk4
Unc-51 like kinase 4.
   
 0.510
bub3
BUB3 mitotic checkpoint protein.
    
 0.506
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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