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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elp6Elongator acetyltransferase complex subunit 6. (273 aa)    
Predicted Functional Partners:
elp4
Elongator acetyltransferase complex subunit 4.
   
 0.968
elp5
Elongator acetyltransferase complex subunit 5.
    
 0.965
elp1
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 0.805
elp2
Elongator acetyltransferase complex subunit 2.
    
 0.767
elp3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 0.741
pipox
Pipecolic acid oxidase.
    
   0.727
ENSSDUP00000008996
Immunoresponsive gene 1, like.
    
   0.503
LOC111226511
Immunoresponsive gene 1, like.
    
   0.503
acod1
Aconitate decarboxylase 1.
    
   0.503
zbtb25
Zinc finger and BTB domain containing 25.
    
   0.502
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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