Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC111228163Phosphatase and actin regulator 4a. (1018 aa)    
Predicted Functional Partners:
tbl2
Transducin (beta)-like 2.
      
 0.609
Slitrk6
SLIT and NTRK-like family, member 6.
      
 0.593
tmod3
Tropomodulin 2.
   
   0.575
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.560
vax2
Ventral anterior homeobox 2.
      
 0.520
tmem252
Uncharacterized protein.
      
 0.515
homer2
Homer scaffold protein 2.
    
   0.490
HOMER1
Homer scaffold protein 1.
    
   0.490
plagl2
Pleiomorphic adenoma gene-like 2.
    
 
 0.442
plag1
Pleiomorphic adenoma gene 1.
    
 
 0.442
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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