Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ostf1Osteoclast stimulating factor 1. (214 aa)    
Predicted Functional Partners:
LOC111232482
Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.742
LOC111234119
Myosin IEb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.742
myo1e
Myosin IEa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.742
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.715
vegfc
Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.
    
 0.693
ccnc
Cyclin C; Belongs to the cyclin family.
     
 0.646
immt
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.602
pdcd5
Programmed cell death 5.
    
 
 0.598
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.586
ppp1r14b
Protein phosphatase 1, regulatory (inhibitor) subunit 14Bb.
    
 0.559
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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