STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem204Transmembrane protein 204. (226 aa)    
Predicted Functional Partners:
ENSSDUP00000022014
Uncharacterized protein.
      
 0.506
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
   
  
 0.487
LOC111220553
TPR_REGION domain-containing protein.
      
 0.485
xpc
Xeroderma pigmentosum, complementation group C.
      
 0.453
tmem178a
Transmembrane protein 178.
   
  
 0.449
LOC111229816
Fin bud initiation factor a.
  
   
 0.422
cfap161
Cilia and flagella associated protein 161.
      
 0.420
rrp36
Ribosomal RNA processing 36.
      
 0.420
trappc6b
Trafficking protein particle complex 6b.
      
 0.418
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.