close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111228176Nuclear receptor subfamily 0, group B, member 2b. (262 aa)    
Predicted Functional Partners:
nr5a2
Nuclear receptor subfamily 5, group A, member 2.
   
0.782
nr5a1
Nuclear receptor subfamily 5, group A, member 1a.
   
0.782
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.629
PPARA
Peroxisome proliferator-activated receptor alpha b.
   
 0.629
med1
Mediator complex subunit 1.
    
 0.598
ppara
Peroxisome proliferator-activated receptor alpha a.
   
 0.595
ncor1
Nuclear receptor corepressor 1.
    
 0.592
ncor2
Nuclear receptor corepressor 2.
    
 0.592
LOC111237271
Hepatocyte nuclear factor 4, gamma.
   
0.589
hnf4a
Hepatocyte nuclear factor 4, alpha.
   
0.589
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: medium (48%) [HD]