Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
akip1A kinase (PRKA) interacting protein 1. (167 aa)    
Predicted Functional Partners:
LOC111220195
Dehydrogenase/reductase (SDR family) member 7Cb.
      
 0.643
LOC111217604
Dehydrogenase/reductase (SDR family) member 7Ca.
      
 0.643
LSM10
LSM10, U7 small nuclear RNA associated.
      
 0.612
prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
    
 
 0.525
med1
Mediator complex subunit 1.
      
 0.513
POC1B
POC1 centriolar protein B.
    
   0.505
POC1A
POC1 centriolar protein A.
    
   0.505
gpkow
G patch domain and KOW motifs.
      
 0.497
LOC111224648
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.495
ube2n
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.495
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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