sbds protein (Seriola dumerili) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

sbds

SBDS ribosome maturation factor. (249 aa)

Predicted Functional Partners:

EFL1

0.965

rpl37a

0.945

rpl11

0.919

mrto4

0.867

rpl24

0.839

uba52

0.834

LOC111228782

0.834

ENSSDUP00000009749

0.830

rplp0

0.809

rpsa

0.800

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL1	ENSSDUP00000009749	ENSSDUP00000018237	ENSSDUP00000009749	Elongation factor like GTPase 1.	Ubiquitin-like domain-containing protein.	0.671
EFL1	LOC111228782	ENSSDUP00000018237	ENSSDUP00000018383	Elongation factor like GTPase 1.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.671
EFL1	mrto4	ENSSDUP00000018237	ENSSDUP00000021128	Elongation factor like GTPase 1.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.902
EFL1	rpl11	ENSSDUP00000018237	ENSSDUP00000011312	Elongation factor like GTPase 1.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.963
EFL1	rpl24	ENSSDUP00000018237	ENSSDUP00000007826	Elongation factor like GTPase 1.	Ribosomal protein L24.	0.939
EFL1	rpl37a	ENSSDUP00000018237	ENSSDUP00000002450	Elongation factor like GTPase 1.	Ribosomal protein L37a.	0.860
EFL1	rplp0	ENSSDUP00000018237	ENSSDUP00000031689	Elongation factor like GTPase 1.	Ribosomal protein, large, P0.	0.888
EFL1	rpsa	ENSSDUP00000018237	ENSSDUP00000012678	Elongation factor like GTPase 1.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.829
EFL1	sbds	ENSSDUP00000018237	ENSSDUP00000001945	Elongation factor like GTPase 1.	SBDS ribosome maturation factor.	0.965
EFL1	uba52	ENSSDUP00000018237	ENSSDUP00000013443	Elongation factor like GTPase 1.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.671
ENSSDUP00000009749	EFL1	ENSSDUP00000009749	ENSSDUP00000018237	Ubiquitin-like domain-containing protein.	Elongation factor like GTPase 1.	0.671
ENSSDUP00000009749	mrto4	ENSSDUP00000009749	ENSSDUP00000021128	Ubiquitin-like domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.923
ENSSDUP00000009749	rpl11	ENSSDUP00000009749	ENSSDUP00000011312	Ubiquitin-like domain-containing protein.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.980
ENSSDUP00000009749	rpl24	ENSSDUP00000009749	ENSSDUP00000007826	Ubiquitin-like domain-containing protein.	Ribosomal protein L24.	0.981
ENSSDUP00000009749	rpl37a	ENSSDUP00000009749	ENSSDUP00000002450	Ubiquitin-like domain-containing protein.	Ribosomal protein L37a.	0.972
ENSSDUP00000009749	rplp0	ENSSDUP00000009749	ENSSDUP00000031689	Ubiquitin-like domain-containing protein.	Ribosomal protein, large, P0.	0.974
ENSSDUP00000009749	rpsa	ENSSDUP00000009749	ENSSDUP00000012678	Ubiquitin-like domain-containing protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.987
ENSSDUP00000009749	sbds	ENSSDUP00000009749	ENSSDUP00000001945	Ubiquitin-like domain-containing protein.	SBDS ribosome maturation factor.	0.830
LOC111228782	EFL1	ENSSDUP00000018383	ENSSDUP00000018237	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Elongation factor like GTPase 1.	0.671
LOC111228782	mrto4	ENSSDUP00000018383	ENSSDUP00000021128	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.923