sbds protein (Seriola dumerili) - STRING interaction network

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[Homology]

Score

sbds

SBDS ribosome maturation factor. (249 aa)

Predicted Functional Partners:

EFL1

0.984

eif6

0.950

rpl37a

0.869

mrto4

0.841

rpl11

0.813

rpl34

0.788

mcts1

0.778

rplp0

0.774

rpl6

0.758

snu13

0.739

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL1	eif6	ENSSDUP00000018237	ENSSDUP00000024079	Elongation factor like GTPase 1.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.948
EFL1	mrto4	ENSSDUP00000018237	ENSSDUP00000021128	Elongation factor like GTPase 1.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.832
EFL1	rpl11	ENSSDUP00000018237	ENSSDUP00000011312	Elongation factor like GTPase 1.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.855
EFL1	rpl34	ENSSDUP00000018237	ENSSDUP00000009779	Elongation factor like GTPase 1.	Ribosomal protein L34.	0.780
EFL1	rpl37a	ENSSDUP00000018237	ENSSDUP00000002450	Elongation factor like GTPase 1.	Ribosomal protein L37a.	0.747
EFL1	rpl6	ENSSDUP00000018237	ENSSDUP00000031988	Elongation factor like GTPase 1.	Ribosomal protein L6.	0.656
EFL1	rplp0	ENSSDUP00000018237	ENSSDUP00000031689	Elongation factor like GTPase 1.	Ribosomal protein, large, P0.	0.806
EFL1	sbds	ENSSDUP00000018237	ENSSDUP00000001945	Elongation factor like GTPase 1.	SBDS ribosome maturation factor.	0.984
EFL1	snu13	ENSSDUP00000018237	ENSSDUP00000006029	Elongation factor like GTPase 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.613
eif6	EFL1	ENSSDUP00000024079	ENSSDUP00000018237	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Elongation factor like GTPase 1.	0.948
eif6	mrto4	ENSSDUP00000024079	ENSSDUP00000021128	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.969
eif6	rpl11	ENSSDUP00000024079	ENSSDUP00000011312	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.945
eif6	rpl34	ENSSDUP00000024079	ENSSDUP00000009779	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal protein L34.	0.959
eif6	rpl37a	ENSSDUP00000024079	ENSSDUP00000002450	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal protein L37a.	0.887
eif6	rpl6	ENSSDUP00000024079	ENSSDUP00000031988	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal protein L6.	0.920
eif6	rplp0	ENSSDUP00000024079	ENSSDUP00000031689	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal protein, large, P0.	0.936
eif6	sbds	ENSSDUP00000024079	ENSSDUP00000001945	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	SBDS ribosome maturation factor.	0.950
eif6	snu13	ENSSDUP00000024079	ENSSDUP00000006029	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.826
mcts1	sbds	ENSSDUP00000008025	ENSSDUP00000001945	Malignant T-cell-amplified sequence.	SBDS ribosome maturation factor.	0.778
mrto4	EFL1	ENSSDUP00000021128	ENSSDUP00000018237	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Elongation factor like GTPase 1.	0.832